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Easy Gluten Free Apple Muffins

4.52 from 62 ratings

Easy Gluten Free Apple Muffins are perfectly spiced and simple to make! They are fluffy, soft and are super moist.

Gluten Free Apple Muffins in a white muffin pan on a blue and white striped kitchen towel.

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Simple Gluten Free Apple Muffins

These SUPER EASY Gluten Free Apple Muffins may be a familiar recipe for you if you’ve purchased my cookbook, The Gluten-Free Quick Breads Cookbook. If you love gluten free baking, you’ll enjoy this cookbook! The ingredients are all the same but I’ve scaled the recipe down to make one dozen muffins.

That recipe is one of my favorites because it’s one of my grandmother’s recipes. Family recipes are always the best kind of recipes ❤️


This gluten free muffin recipe is one that you’re going to want in your regular breakfast rotation. You can make them quickly and they’re great for meal prep. They freeze especially great too!

My oldest loves these muffins with a capital L-O-V-E. She eats them for breakfast, she wants them in her lunchbox, and she wants them for snack too. I swear, she’s going to turn into an apple muffin before Halloween! No costume needed 🤣

I promise, you’ll be just as obsessed with them too!

Why You Will Absolutely Love Gluten Free Apple Muffins

  • Believe it or not, they are surprisingly easy to make!
  • The apple flavor really shines, especially when using the right apples (more on that later)
  • They are unbelievably super moist and fluffy. When you take a bite, it’s a bite of apple-heaven!
  • They make a quick and easy breakfast or tasty snack when you need a little pick-me-up during the day.
Gluten Free Apple Muffins in a white muffin pan

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Ingredients for GF Apple Muffins

  • Apple Cider – I love the extra apple flavor that apple cider brings to this recipe. It’s a more intense flavor than regular apple juice. Bonus, using apple cider in place of milk makes these muffins naturally dairy free!
  • Fresh Apple – Use a good baking apple in this recipe so the apple holds its shape and texture. See my recommendations for baking apples here.
  • Spices – These muffins are loaded with flavor thanks to cinnamon, nutmeg, and allspice. I probably should have called these Apple Cinnamon Muffins!
  • Oil – I always bake with avocado oil when I’m baking muffins or quick breads. You can sub it with canola oil, vegetable oil, or melted coconut oil.
  • Gluten free flour blend. I recommend my nightshade free mix but you can also use Bob’s Red Mill 1:1 Gluten Free Baking Flour
  • xanthan gum (omit if your flour blend contains it)
  • granulated sugar
  • baking soda (note: NOT baking powder)
  • fine sea salt
  • ground cinnamon
  • ground nutmeg
  • ground allspice
  • light brown sugar, packed
  • 2 large eggs room temperature
  • 3/4 cup apple cider room temperature
  • 1/4 cup avocado oil see notes
  • 1 teaspoon pure vanilla extract
  • 1 medium apple peeled and finely diced (about 1 cup or 140g)

Equipment Needed to Make Gluten Free Muffins

Nutrition Facts are estimated. Please consult a doctor or nutritionist if you have special dietary needs.

How to Make Gluten Free Apple Muffins

Step 1. Preheat oven to 400 degrees and line a standard muffin tin with 12 paper liners or spray with non-stick spray.

Step 2. Then, in a large mixing bowl, whisk together the gluten free flour, xanthan gum, granulated sugar, baking soda, salt, cinnamon, nutmeg, and allspice. Then set aside.

Step 3. Meanwhile, in a medium bowl, whisk together the brown sugar, eggs, apple cider, oil, and vanilla extract.

Step 4. Pour the wet ingredients into the dry ingredients and mix until just combined. Mix in the apples.

Step 5. Divide the batter evenly between the 12 muffin cups and then bake for 16-18 minutes (it took a full 18 minutes in my oven).

Step 6. Finally, cool the muffins on a wire rack. Serve warm or room temperature.


Measuring your GF Flour Blend tips

I HIGHLY recommend you follow and sign up for this free guide on how to properly measure your GF flour blends. This is a step that is often overlooked but is extremely important!  By following this guide I provide you, it will increase the quality of the recipes that you bake.  You won’t be disappointed!

Pro Tips for Making this Gluten Free Apple Muffin Recipe

  • If your gluten free flour blend contains xanthan gum, omit the amount I call for in the recipe.
  • For best results in this recipe, make sure your eggs and apple cider are room temperature.
  • Use an apple that’s suitable for baking. (See “Ingredients” above!)
Nutrition Facts are estimated. Please consult a doctor or nutritionist if you have special dietary needs.

How to store, freeze, and unthaw instructions

To Store:

After the muffins are completely cooled, store them in an air-tight container for 3-4 days on your kitchen table or counter. Make sure they are cooled because if not, the steam will create condensations which will make for soggy muffins and they may spoil quicker.

To Freeze:

Once again, make sure they cool thoroughly on a wire rack. You can then store them in gallon-sized freezer bags or air-tight containers for 3-4 months in your freezer.

To thaw:

Take the muffins out of the freezer the night before and allow them to thaw. Then, enjoy the next morning at room temperature or warm them in your oven for a few minutes.

What do I do with extra apples?

  1. Apple Sauce: Make a simple apple sauce!
  2. Apple Crisp or Crumble: You can whip up a quick apple crisp or crumble. Bake until golden brown and tender. Yummy!
  3. Apple Pie: If you have enough apples, you can make a mouth-watering gluten free apple pie.
  4. Apple Chips: Slice a few apples thin, sprinkle with cinnamon or other spices, and bake them at a low temperature until they’re crispy. This would be a nice snack!
  5. Salads: Add sliced or diced apples to your salads for a bit of sweet and crunchy.
  6. Smoothies: Blend apples into your morning, tastysmoothie
  7. Apple Pancakes or Waffles: Mix small apple chunks into your GF pancake or waffle batter for a little bit breakfast fun!
  8. Apple Jam or Chutney: Use those leftover apples and turn them into a delicious jam or chutney.
  9. Apple Slaw: Create a quick slaw by shredding apples and mixing them with cabbage, carrots, and a light dressing for a nice snack or light lunch.
  10. Apple and Cheese Pairings: Here’s a fun party idea. Serve apple slices with various cheeses for a delicious appetizer or snack.
  11. Apple Salsa: Dice apples and combine them with ingredients like onions, tomatoes, cilantro, and lime juice to make a fun tasting salsa.
  12. Apple Ice Cream Topping: Sauté sliced apples in butter and brown sugar until they’re nice and soft and caramelized. Then, serve them warm over vanilla ice cream.

Other Gluten Free Muffins To Try:


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Gluten Free Apple Muffins in a white muffin pan on a blue and white striped kitchen towel.

Easy Gluten Free Apple Muffins

4.52 from 62 ratings
These simple gluten free apple muffins are easy to make and make a great Fall breakfast.
Prep Time: 15 minutes
Cook Time: 18 minutes
Total Time: 33 minutes
Servings: 12
Print Rate Pin

Ingredients

  • 1 3/4 cups 250 g gluten free flour blend (see notes)
  • 3/4 teaspoon 2 g xanthan gum (omit if your flour blend contains it)
  • 1/2 cup 102 g granulated sugar
  • 1 teaspoon 6 g baking soda
  • 1/2 teaspoon 3 g fine sea salt
  • 1 1/2 teaspoons 4 g ground cinnamon
  • 1/4 teaspoon ground nutmeg
  • 1/8 teaspoon ground allspice
  • 1/2 cup 115 g light brown sugar, packed
  • 2 large eggs room temperature
  • 3/4 cup apple cider room temperature
  • 1/4 cup avocado oil see notes
  • 1 teaspoon pure vanilla extract
  • 1 medium apple peeled and finely diced (about 1 cup or 140g)

Instructions

  • Preheat oven to 400 degrees and line a standard muffin tin with 12 paper liners or spray with non-stick spray.
  • In a large bowl, whisk together the gluten free flour, xanthan gum, granulated sugar, baking soda, salt, cinnamon, nutmeg, and allspice. Then set aside.
  • In a medium bowl, whisk together the brown sugar, eggs, apple cider, oil, and vanilla extract.
  • Pour the wet ingredients into the dry ingredients and mix until just combined. Mix in the apples.
  • Divide the batter evenly between the 12 muffin cups and then bake for 16-18 minutes (it took a full 18 minutes in my oven).
  • Cool the muffins on a wire rack. Serve warm or room temperature.

Notes

  1. For this recipe, I used my Nightshade-Free Gluten Free Flour Mix. If the flour blend you use contains xanthan gum, omit the amount called for in the recipe.
  2. Canola Oil or Vegetable Oil can be subbed for the Avocado Oil.
  3. Leftover muffins keep in an airtight container at room temperature up to 2 days. These muffins can also be frozen.

Nutrition Information

Serving: 1g | Calories: 168kcal | Carbohydrates: 26g | Protein: 3g | Fat: 6g | Saturated Fat: 1g | Polyunsaturated Fat: 4g | Cholesterol: 31mg | Sodium: 40mg | Fiber: 1g | Sugar: 11g

Disclaimers

As an Amazon Associate and member of other affiliate programs, I earn from qualifying purchases.

Nutrition Facts are estimated and aren't always accurate. Please consult a doctor or nutritionist if you have special dietary needs.

Did you make this?Mention @whattheforkfoodblog or leave a comment rating below!

Did you make this gluten free muffin recipe? Leave a star rating and let me know in the comments! You can also leave a photo/comment on this pin for others to see.

4.52 from 62 votes (61 ratings without comment)

Leave a comment

If you made this recipe, please consider giving it a star rating when you post a comment. Star ratings help people discover my recipes online.

Sincerely,
Shay

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Recipe Rating




  1. Bob says:

    5 stars
    Delicious and moist. Doesn’t need all the sugar, reduce by 1/4 at least

  2. meagan trento says:

    My daughter has just recently been switched over to a gluten free diet. I love this recipe! I think she will go crazy over these apple muffins. Look so good. I also signed up for your newsletter too! Have a weekend.

  3. Rosemary says:

    I just made these for breakfast. We just got a bunch of apples from the neighbor. The muffins came out tasting like apple cider vinegar.

    Now, this could be my fault. I switched out white sugar and added honey and I doubled the recipe. I’m fairly certain I only put 1.5 cups of apple vinegar in the recipe and I was really surprised at how much it fizzed when I added the wet ingredients.

    I would love to make these again. We still have a lot of apples. Do I just need to switch out the honey back to white sugar? Any suggestions?

    • Rosemary says:

      @Shay,

      Ya the apple cider vinegar was why it tasted like vinegar had nothing to do with the honey. hahaha. I read it right but translated it as apple cider vinegar. I tried it again with apple juice instead of apple cider vinegar. SO much better. thanks!

    • Shay says:

      Hi Rosemary! I’m so glad you tried my recipe! I’m so sorry they came out tasting like vinegar. This recipe doesn’t call for vinegar, just regular Apple Cider so that would be why your muffins came out tasting like vinegar.
      Next time just use Apple Cider or Apple Juice and you’ll be amazed at how much better they taste 🙂

  4. Rachel says:

    Would this recipe work baked in a loaf pan? How long would it be baked approximately?

  5. Shay says:

    Thanks so much Julie!